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Re: [PyMOL] Selection of elements in object
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From: Marko H. <mh...@ca...> - 2020-03-20 17:35:07
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<tt>Hello Henrik, <br>
<br>
your syntax is not correct:<br>
select name_for_selection, selected_parts<br>
<a class="moz-txt-link-freetext" href="https://pymolwiki.org/index.php/Select">https://pymolwiki.org/index.php/Select</a><br>
<br>
eg. <br>
select my_carbons, elem C & obj <br>
will select atoms that are element C AND in obj and calls this
selection my_carbons. <br>
<br>
hth, Marko<br>
</tt><br>
<div class="moz-cite-prefix">On 20/03/2020 13:40, Henrik Gotfredsen
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:CAD...@ma...">
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<div dir="ltr">Dear Pymol users
<div><br>
</div>
<div>Would anyone be able to help with the correct syntax used
for selecting specific elements within an object?</div>
<div><br>
</div>
<div>For example, I would like to be able to select only carbon
or hydrogen. </div>
<div><br>
</div>
<div>select elem c (works but selects all the carbons in my
project)</div>
<div>select elem c, obj (this selects all atoms within 'obj' as
selection 'elem_c')</div>
<div><br>
</div>
<div>Any suggestions are much appreciated :)</div>
<div><br>
</div>
<div>Many thanks!</div>
<div>Henrik </div>
</div>
<br>
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<br>
<pre class="moz-signature" cols="72">--
Marko Hyvonen
Department of Biochemistry, University of Cambridge
<a class="moz-txt-link-abbreviated" href="mailto:mh...@ca...">mh...@ca...</a>
+44 (0)1223 766 044
@HyvonenGroup
<a class="moz-txt-link-freetext" href="http://hyvonen.bioc.cam.ac.uk">http://hyvonen.bioc.cam.ac.uk</a>
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