[PyMOL] Pymol Rendering

[Seán D. <dow...@tc...>]

Hi all,

I am trying to render an image of a protein structure with a transparent
surface and a slightly less transparent cartoon structure, of the same
colour, in order to show both the cartoon structure and a ligand
(non-transparent) bound within as well as the surface. Using the ray
option, the ligand is visible, but the semi-transparent cartoon is not.
Does anyone have any insight into this.  Note I am using version 2.2.3.

All the best,

Seán Downey