Re: [PyMOL] How to see a homotetramer

[Ali K. <aku...@un...>]

Hi Clelia,

You can use the split_states command on 6h07 to make each frame an object,

If you want to combine them into a single object, use the following to make the chains unique:
alter 6h07_0002 and chain A, chain = 'C'
alter 6h07_0002 and chain B, chain = 'D'

Then combine using:
create 6h07_assembly, 6h07_*

Cheers,

Ali

Ali Kusay | BPharm (Hons) | PhD Candidate
The University of Sydney School of Pharmacy | Faculty of Medicine and Health
424, Brain and Mind Centre | The University of Sydney | NSW 2050

From: Clelia Canova <cle...@gm...>
Date: Tuesday, 14 January 2020 at 7:45 pm
To: "pym...@li..." <pym...@li...>
Subject: [PyMOL] How to see a homotetramer

Hi!

I’m studying the file 6H07. pdb for a project, download for rcsb.com.
How can I see the Biological Assembly on Pymol like in PDB, instead of seeing only the monomer (asymmetric unit).

In the screen I see 6h07 1/4 and not 4/4.

In the commander zone it’s written:
 ” Detected 4 cpu cores. Enable multithreaded rendering.”
If I push the key PLAY the protein start to move fast from 1 to 4 of 4 positions.

How can I see the 4 position together??

Thank you very much,
Clelia Canova