Re: [PyMOL] Calculate the angle between two domains

[Jared S. <jar...@co...>]

Hi Yikan -

Check out: https://pymolwiki.org/index.php/Angle_between_domains

Hope that helps.

Cheers,
Jared

On November 27, 2019 at 4:02:34 AM, Zhang Yikan via PyMOL-users (pym...@li...) wrote:

Hi all,
I am a beginner of the PyMol script. I have 200 pdbs(names, C_1, C_2, …..C_200), and all of them contain 2 domains(resi 1-80, or resi 92-160). I want to calculate the rotation angle between the two domains. I do this calculation with the orientation.py in batch mode.  Do someone know how to do that? Thank you!


Best,
Yikan
Ph. D
TsingHua University
School of life Sciences
Beijing, China
tel:010-62773783
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