Re: [PyMOL] amino acids displayed for mutagenesis. Hyp? PTMs? (Bruce Onisko)

[Thomas H. <tho...@sc...>]

Hi Bruce,

Worked for me without issues, on all platforms (Windows, Linux, Mac).

Installation:
1) Open PyMOL
2) Plugin > Plugin Manager > Install New Plugin
3) Install from PyMOLWiki or any URL
   URL: https://pymolwiki.org/index.php/Pytms
4) Click "Fetch"

Test Usage:
1) Load something:
    fetch 1ubq
    as lines
2) Plugin > Legacy Plugins > PyTMs
3) Click "Acetylation" on the left
4) Click "Modify: Acetylation!" in the bottom right

Cheers,
  Thomas

> On Sep 5, 2019, at 6:22 AM, Bruce Onisko <bco...@gm...> wrote:
> 
> Dear all,
> 
> I just read "PyTMs: a useful PyMol plugin for modelling common post-translational modifications" and it looks great for my needs.
> 
> However after an hour of frustration I have not been able to download and install the plugin.  (I had no trouble downloading, installing and using the SwissModel plugin.......)
> 
> Has anyone done this recently?  If so maybe point me to a working link, or step me through the process please?
> 
> Thanks!
> 
> Bruce

--
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.