Re: [PyMOL] Minimum mesh spacing

[Thomas H. <tho...@sc...>]

Hi Vatsal,

The "min_mesh_spacing" setting only affects the "mesh" representation of molecules (molecular surface). To increase the mesh density of an isomesh, you need to upsample the map with the "map_double" command.

https://pymolwiki.org/index.php/Map_Double

Hope that helps.

Cheers,
  Thomas

> On Apr 26, 2019, at 12:42 AM, Vatsal Purohit <vat...@gm...> wrote:
> 
> Hello,
> 
> I've been trying to use the minimum mesh spacing feature on pymol to make my meshes more defined and it doesn't seem to do anything. 
> 
> I use .map.ccp4 files that I generated on ccp4 using .mtz files I generated on phenix. Any suggestions on what I might be doing wrong and what I could do to fix this would be really appreciated!
> 
> Regards,
> Vatsal 
> 
> -- 
> Vatsal Purohit
> 
> PhD Candidate, Stauffacher Lab, Dept. of Biology, Purdue University
> PULSe-Biophysics and Structural Biology training group
> vp...@pu... | 346-719-9409
> 
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--
Thomas Holder
PyMOL Principal Developer
Schrödinger, Inc.