Re: [PyMOL] Printing Protein Surface residues

[Osvaldo M. <alo...@gm...>]

Hi Vinod

The exposed residues are stored in the selection “exposed_res_02”. You can
iterate <http://www.pymolwiki.org/index.php/Iterate> this selection to get
several properties like the residues names, for example the command:

iterate exposed_res_02, resn

will return the name of the residues, and the command

iterate exposed_res_02, resn, resi

will return the name and the residue number.

Cheers,
Osvaldo.

On Thu, May 21, 2015 at 7:03 AM, Vinod Devaraji <
vin...@sc...> wrote:

Hi All
>
> I have a task in hand where need your suggestions and comments
>
> Task is to print list of solvent exposed surface amino acids or protein
> surface amino acids .
>
> By searching I had found this script
> http://www.pymolwiki.org/index.php/FindSurfaceResidues
>
> which select the residues on the surface but I dont know
>
> how to print the residues names as an output ?
>
> Thanks in advance ...
>
> --
> Please feel free to call me or mail me
>
> Thanks and Regards
>
> Vinod.D M.Pharm.
> Jr. Applications Scientist
> Mobile no:+91-9900090044
>
> http://www.schrodinger.com/
>
>
>
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