From: Douglas H. <Dou...@ed...> - 2014-11-12 12:14:09
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Hi all, I installed Optimize.py, now when I start Pymol I see: "Optimize plug-in needs openbabel to be installed in your system, please follow the instructions at http://openbabel.org/wiki/Get_Open_Babel" If I try to use any optimize commands I get: "PyMOL>minimize all, nsteps 2 Traceback (most recent call last): File "/usr/people/douglas/programs/pymol-v1.7.2.3/modules/pymol/parser.py", line 254, in parse self.result=apply(layer.kw[0],layer.args,layer.kw_args) File "/usr/people/douglas/programs/pymol-v1.7.2.3/modules/pmg_tk/startup/optimize.py", line 237, in minimize obconversion = ob.OBConversion() NameError: global name 'ob' is not defined " Open Babel IS installed on my system (v2.3.2), do I need to tell Pymol where? cheers, Doug -- The University of Edinburgh is a charitable body, registered in Scotland, with registration number SC005336. |