From: Abhinav K. <abh...@sl...> - 2014-05-21 15:26:57
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Hi, I installed pymol ( pymol-v1.7.0.5-Linux-x86_64.tar.bz2) on my ubuntu (12.04 LTS) desktop and this was working fine. Later, I upgraded my Ubuntu to 14.04 LTS and now pymol has become extremely sluggish. Even rotating a small molecule like ATP takes a while. Any suggestions on how to fix this? Coot and rasmol are not affected by this Ubuntu upgrade. Thanks, Abhinav ______________________________________ Abhinav Kumar, Ph.D. The Joint Center for Structural Genomics MS99, SLAC National Accelerator Laboratory 2575 Sand Hill Rd, Menlo Park, CA 94025 (650) 926-2992 On 05/13/2014 10:43 AM, Thomas Holder wrote: > Greetings, > > We'd like to announce the release of Incentive PyMOL 1.7.0.5, which is a bugfix release. Applicable bugfixes have also been pushed to the sourceforge SVN repository as Open-Source PyMOL 1.7.1.3 (SVN rev 4076). > > Fixed bugs include: > > Incentive PyMOL (for licensed users): > - don't disable all shaders if geometry shaders are not available > - many z-depth issues for labels and connectors in immediate, shader, and > ray tracing (all renderings should now look almost exactly the same) > - background in front of text with use_shaders=0 > - label picking broken with use_shaders=0 > - character rendering in ray tracing > - clipped text in multi-line labels (shader on and off) > > Open Source and Incentive PyMOL: > - cartoon memory leak > - CGO colors ignored with ALPHA > - hidden groups flash in scene based movies > - "A > find > polar contact > just intra-side chain" broken > - "scene auto, update" broken > - small solvent_radius crashes Surface generation > - grid_mode support for volumes > > Some of these changes have been in the SVN repository for a couple of weeks. > > Download: > Installers for Incentive PyMOL: http://pymol.org/dsc/ip/ > Open Source: http://sourceforge.net/p/pymol/ > > Cheers, > The PyMOL Team at Schrödinger > |