Re: [PyMOL] Fwd: Torsion angles

[Thomas H. <sp...@us...>]

Hi James,

> Could you tell me in what strings the marker for the particular ss 
> element is defined ( e.g I want to change from triangle to oval 
> representation for alpha-helixes )?

look for this line:

     mark = {'H': 'Tri', 'S': 'Rect'}.get(ss, self.mark)

I just updated the PyMOLWiki page with the modifications (but markers by 
secondary structure are disabled by default to not change the previous 
behaviour).

http://pymolwiki.org/index.php/DynoPlot

Cheers,
   Thomas

-- 
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen