From: Jason V. <jas...@sc...> - 2011-10-25 17:24:40
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Hi Lina, 1] do I need generate the map from ccp4 > > (I have already installed the ccp4i, but seems not easy to know how > to get the map) > The CCP4 file is a map. Once the map is loaded into PyMOL you can choose how you want to represent the data: isomesh, isosurface, slice, gradient, or the new volumes. To make a new representation for the map choose one of those from the "A" (Action) button. > 2] For small molecular (ligand), the ccp4 is the best way to obtain > its electron density map? > PyMOL natively reads these maps, so you don't need ccp4i or any special plugins. Cheers, -- Jason -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) Jas...@sc... (o) +1 (603) 374-7120 |