Re: [PyMOL] how to organize those .py

[Thomas H. <sp...@us...>]

Hi Lina,

you can put a .pymolrc file in your home directory, it's a script that 
PyMOL will read on each startup. You can have it either in PyMOL syntax 
or as a python script, depending on the file extension.

/home/lina/.pymolrc      (in PyMOL syntax)
/home/lina/.pymolrc.py   (in python syntax)

http://www.pymolwiki.org/index.php/Pymolrc

Then create a directory -- lets say /home/lina/.pymol -- and put the 
PyMOLWiki scripts there. And in your .pymolrc you put lines like these 
(PyMOL syntax):

run /home/lina/.pymol/Grepsel.py
run /home/lina/.pymol/Polarpairs.py
run /home/lina/.pymol/Propka.py
... and so on

Cheers,
   Thomas

lina wrote, On 09/19/11 07:10:
> Hi,
> 
> Just a quick Q:
> 
> How can I better organize those *.py I mainly obtained from pymol wiki,
> not those can be installed by the plugins,
> 
> pymol run in different directory each time.
> 
> Thanks,
> 
> -- 
> Best Regards,
> 
> lina

-- 
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen