From: Martin H. <ma...@bl...> - 2011-05-04 21:09:00
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Dear all thanks for the support, this is most helpfull. Kind regards Martin Am 04.05.11 09:38, schrieb Hongbo Zhu: > Yes, great trick: > > fetch 1avd, type=pdb1 > > On 05/03/2011 10:22 PM, li...@co... wrote: >> http://www.rcsb.org/pdb/files/1avd.pdb1 >> >> The key is adding 1 to the suffix. Sometimes there is more than one biological unit, in which case, there is a pdb2, pdb3, etc. >> >> -David >> >> On May 3, 2011, at 4:00 PM, Martin Hediger<ma...@bl...> wrote: >> >>> Dear all >>> I would like to ask how it is possible to download the coordinate file >>> for the biological assembly of a protein structure from the PDB. >>> Naturally, this is not a question directly related to PyMOL, but I >>> thought I'll be reaching at least a couple of >>> Biochemists/Chrystallographers who know how to do this. >>> As an example, when downloading the PDB file of "1AVD", I get a file >>> with two chains. The biological assembly would be a tetramer, so I >>> wonder what URL I would require to write into a script that does the >>> downloading. >>> >>> Thanks for help on this. >>> Martin >>> >>> ------------------------------------------------------------------------------ >>> WhatsUp Gold - Download Free Network Management Software >>> The most intuitive, comprehensive, and cost-effective network >>> management toolset available today. Delivers lowest initial >>> acquisition cost and overall TCO of any competing solution. >>> http://p.sf.net/sfu/whatsupgold-sd >>> _______________________________________________ >>> PyMOL-users mailing list (PyM...@li...) >>> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users >>> Archives: http://www.mail-archive.com/pym...@li... >> ------------------------------------------------------------------------------ >> WhatsUp Gold - Download Free Network Management Software >> The most intuitive, comprehensive, and cost-effective network >> management toolset available today. Delivers lowest initial >> acquisition cost and overall TCO of any competing solution. >> http://p.sf.net/sfu/whatsupgold-sd >> _______________________________________________ >> PyMOL-users mailing list (PyM...@li...) >> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users >> Archives: http://www.mail-archive.com/pym...@li... |