|
From: Xiao-Ping Z. <xp...@uc...> - 2010-10-28 00:33:18
|
Dear Jason, Thank you for your reply. I tried sphere_mode command on two machines. On Fedora 13, PyMol 1.3 set sphere_mode, 5 disabled sphere display. set sphere_mode, 4, 3, or 2 can show sphere, but it looks terrible. One Fedora 8, PyMol 1.3 set sphere_mode, 5 also disabled sphere display. But 4 gives a beautiful sphere view. It seems that I need to fix OpenGL on Fedora 13. Best regards, Xiao-Ping On Wed, 2010-10-27 at 17:27 -0400, Jason Vertrees wrote: > Hi Xiao-Ping, > > If you want the _best_ sphere quality, then try, > > set sphere_mode, 5 > > This is pixel-perfect rendering of spheres in PyMOL using openGL > shaders. Otherwise, these quality settings in PyMOL are typically > limited to how much memory your machine has; also, these settings are > usually quadratic or exponential in their use of memory. > > That tutorial looks good, but needs updating to make better use of > PyMOL's features. > > Cheers, > > -- Jason > > On Wed, Oct 27, 2010 at 5:09 PM, Xiao-Ping Zhang <xp...@uc...> wrote: > > Hi, PyMol users, > > > > I have noticed that Justin Lorieau > > (http:www.lorieau.commethods-and-referencemolecular-viewers30-pymol--ball-and-stick-figures.html) can use +ACI-set sphere+AF8-quality, 10+ACI to generate a ball+AF8-stick picture. When I tried to use the same command, PyMol crashed. The default sphere+AF8-quality is 1, 3 is the maximum value that I can use. I am curious what is the maximum value. I am running PyMol 1.3 on Fedora 13. > > Thank you for your help. > > > > Xiao-Ping > > > > > > > > > > ------------------------------------------------------------------------------ > > Nokia and AT&T present the 2010 Calling All Innovators-North America contest > > Create new apps & games for the Nokia N8 for consumers in U.S. and Canada > > $10 million total in prizes - $4M cash, 500 devices, nearly $6M in marketing > > Develop with Nokia Qt SDK, Web Runtime, or Java and Publish to Ovi Store > > http:p.sf.netsfunokia-dev2dev > > _______________________________________________ > > PyMOL-users mailing list (PyM...@li...) > > Info Page: https:lists.sourceforge.netlistslistinfopymol-users > > Archives: http:www...@li... > > > > > |