Re: [PyMOL] How do I use the 'alter' command on a single chain?

[Jason V. <jas...@sc...>]

Hi Sean,

To alter just chain X do,

alter X/54-58/, ss='h'

Cheers,

-- Jason

On Thu, Oct 14, 2010 at 2:12 PM, Davidson, Sean (davidswm)
<DAV...@uc...> wrote:
> Hi.  New user here.  I am trying to use the alter command to change a short
> stretch of sequence from helix to loop using the ''alter' command:
>
>
>
> alter 54-58/, ss='L'
>
>
>
> This works great, but it makes the change to every chain in my structure.  I
> want to localize it to only one chain.  I have tried putting the chain name
> in behind the / but this doesn't work.  Any help will be appreciated.
>
>
>
> Sean
>
> ------------------------------------------------------------------------------
> Beautiful is writing same markup. Internet Explorer 9 supports
> standards for HTML5, CSS3, SVG 1.1,  ECMAScript5, and DOM L2 & L3.
> Spend less time writing and  rewriting code and more time creating great
> experiences on the web. Be a part of the beta today.
> http://p.sf.net/sfu/beautyoftheweb
> _______________________________________________
> PyMOL-users mailing list (PyM...@li...)
> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> Archives: http://www.mail-archive.com/pym...@li...
>



-- 
Jason Vertrees, PhD
PyMOL Product Manager
Schrodinger, LLC

(e) Jas...@sc...
(o) +1 (603) 374-7120