Re: [PyMOL] How does PyMol add hydrogen atoms?

[João R. <an...@gm...>]

Hey Jason,

Thanks! I'd "traced" add_H to that function before but my knowledge of C is
rudimentary so I was quite overwhelmed.

Yet, I think I managed to understand a bit better what's going on, but
correct me if I'm wrong. It seems PyMol looks for neighbours first, derives
a "bonding network" from that, and then calculates valences.

Thanks a lot for the help! And good luck with the new city!

João