Re: [PyMOL] Extracting Amino Acid Sequence from PDB File

[Joel T. <joe...@ot...>]

You can also download the sequence directly from the pdb

J
_________________________________

Joel Tyndall, PhD

Senior Lecturer in Medicinal Chemistry
National School of Pharmacy
University of Otago
PO Box 56 Dunedin 9054
New Zealand                    
http://www.researcherid.com/rid/C-2803-2008

Pukeka Matua
Te Kura Taiwhanga Putaiao
Te Whare Wananga o Otago
Pouaka Poutapeta 56 Otepoti 9054
Aotearoa

Ph / Waea               +64 3 4797293
Fax / Waeawhakaahua     +64 3 4797034




-----Original Message-----
From: Buz Barstow [mailto:bu...@ma...] 
Sent: Friday, 14 August 2009 9:35 a.m.
To: pym...@li...; CC...@JI...
Subject: [PyMOL] Extracting Amino Acid Sequence from PDB File

Hi All,

Does anyone know of a program that can extract the amino sequence of a  
protein from a PDB file and output it as a FASTA file?

Thanks! and all the best,

--Buz



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