Re: [PyMOL] Persistent PyMOL pipes? Preventing a call to 'cmd.quit()'.

[DeLano S. <de...@de...>]

Edward,

Add a "K" keepalive option along with the -p:

pymol -pK

Cheers,

DeLano Scientific LLC
Email Support Services 

> -----Original Message-----
> From: pym...@li... 
> [mailto:pym...@li...] On Behalf 
> Of Edward d'Auvergne
> Sent: Sunday, October 29, 2006 9:01 PM
> To: pym...@li...
> Subject: [PyMOL] Persistent PyMOL pipes? Preventing a call to 
> 'cmd.quit()'.
> 
> Hi,
> 
> I am the project administrator for the open source program 
> relax (http://nmr-relax.com or 
> https://gna.org/projects/relax) and am interested in 
> interfacing relax with PyMOL.  relax is a program for 
> studying the dynamics of proteins, RNA, or other organic 
> molecules through the analysis of NMR relaxation data and I 
> would like to display the dynamics results superimposed onto 
> molecular structures within PyMOL.  I have attempted to open 
> a PyMOL pipe using the '-p'
> flag however, when relax finishes and closes the pipe, PyMOL 
> terminates printing the message:
> 
>   PyMOL: normal program termination.
> 
> Is there a simple way to keep the PyMOL binary running after 
> a script terminates?  I've searched through the sources but a 
> solution isn't immediately obvious.  I've tracked back from 
> the file 'layer5/main.c'
> where the 'printf()' statement is located back to the 
> function 'CmdQuit' in the file 'layer4/Cmd.c', but can't find 
> what is calling the 'cmd.quit()' method.
> 
> Thanks,
> 
> Edward
> 
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