RE: [PyMOL] importing pymol modules in a python script

[Warren D. <wa...@de...>]

Alan,

The only sure way to get this to work is to build into a local Python =
interpreter from PyMOL source code using distutils.  Otherwise, you're =
likely better off with "pymol -qc"

Cheers,
Warren

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Warren L. DeLano, Ph.D.                    =20
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> -----Original Message-----
> From: pym...@li...=20
> [mailto:pym...@li...] On Behalf Of Alan
> Sent: Thursday, April 20, 2006 5:37 AM
> To: Pymol
> Subject: [PyMOL] importing pymol modules in a python script
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> Hello List!
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> I want a python script likewise:
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> #!/usr/bin/python -O
> import sys, tempfile
> from pymol import editor
> from pymol import cmd
> ....
> ....
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> However, even defining 'export PYTHONPATH=3D/usr/local/pymol/modules'
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> I got this error:
>     from pymol import editor
>   File "/usr/local/pymol/modules/pymol/__init__.py", line 353, in ?
>     import _cmd
> ImportError: No module named _cmd
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> Is there a way to run the python script with pymol stuff=20
> imported or only via 'pymol -c'?
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> Many thanks in advance.
> Alan
> --
> Alan Wilter S. da Silva, D.Sc. - Research Associate=20
> Department of Biochemistry, University of Cambridge.
> 80 Tennis Court Road, Cambridge CB2 1GA, UK.
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