Re: [PyMOL] Set all settings to default

[Mark A S. <sa...@um...>]

Warren,

The problem is with ray tracing a surface from an old_session.pse.   
Much better results if you retrace it with the version that created  
it.  Thanks for your help.

Mark
_________________________________
Mark A. Saper, Ph.D.
Associate Professor of Biological Chemistry
Biophysics Research Division, University of Michigan

On Feb 28, 2006, at 6:13 PM, Warren DeLano wrote:

> Hi Mark,
>
> Hmm.  PyMOL attempts to migrate old settings into the new model,  
> but it
> isn't perfect and one may need to fiddle with the various settings  
> after
> migration.  We'll need a new feature to reinitialize settings without
> deleting content so thanks for the suggestion!  In the meantime,  
> you can
> do something like this:
>
> from chempy import io
> sess=io.pkl.fromFile("old_session.pse")
> del sess['settings']
> io.pkl.toFile(sess,"new_session.pse")
>
> load new_session.pse
>
> which will load the old session with new default settings.
>
> Cheers,
> Warren
>
> --
> Warren L. DeLano, Ph.D.
> Principal Scientist
>
> . DeLano Scientific LLC
> . 400 Oyster Point Blvd., Suite 213
> . South San Francisco, CA 94080 USA
> . Biz:(650)-872-0942  Tech:(650)-872-0834
> . Fax:(650)-872-0273  Cell:(650)-346-1154
> . mailto:wa...@de...
>
>
>> -----Original Message-----
>> From: pym...@li...
>> [mailto:pym...@li...] On Behalf Of
>> Mark A Saper
>> Sent: Tuesday, February 28, 2006 11:12 AM
>> To: Pymol
>> Subject: [PyMOL] Set all settings to default
>>
>> 0.99 and 0.98 have different ray tracing and lighting models.
>>  When I read an old .pse file into .99, are the settings in
>> the old file converted to the new style?  Is there a way to
>> reset all of the settings to default values, without
>> modifying the objects themselves?
>>
>> Thanks,
>> Mark
>> _________________________________
>> Mark A. Saper, Ph.D.
>> Associate Professor of Biological Chemistry Biophysics
>> Research Division, University of Michigan Chemistry Building
>> Room 3040 930 N University Ave Ann Arbor MI 48109-1055 U.S.A.
>>
>> sa...@um...        (734) 764-3353        fax (734) 764-3323
>> http://www.biochem.med.umich.edu/biochem/research/profiles/saper.html
>>
>>
>>
>>
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