RE: [PyMOL] Can I use the mouse to control multiple windows?

[Michael G. L. <ml...@um...>]

Warren-

I never even noticed the -l option.  That's awesome!

Thanks,

-michael

--
www.umich.edu/~mlerner |                        _  |Michael Lerner
This isn't a democracy;| ASCII ribbon campaign ( ) |   Michigan
it's a cheer-ocracy.   |  - against HTML email  X  |  Biophysics
-Torrence,  Bring It On|                       / \ | mlerner@umich

On Fri, 6 Jan 2006, Warren DeLano wrote:

>
> NOTE: Bug fix for receive.py
>
> # BEGIN receive.py
>
> from pymol import cmd
> from time import sleep
> import os
>
> filename = "view.txt"
>
> while not sleep(0.2):
>    if os.path.exists(filename):
>        try:
>            cmd.set_view(eval(open(filename,'r').read()))
>            os.unlink(filename)
>        except: # if the file isn't yet complete
>            pass
>
> # END receive.py
>
>
> Cheers,
> Warren
>
> --
> Warren L. DeLano, Ph.D.
> Principal Scientist
>
> . DeLano Scientific LLC
> . 400 Oyster Point Blvd., Suite 213
> . South San Francisco, CA 94080 USA
> . Biz:(650)-872-0942  Tech:(650)-872-0834
> . Fax:(650)-872-0273  Cell:(650)-346-1154
> . mailto:wa...@de...
>
>
>> -----Original Message-----
>> From: Warren DeLano
>> Sent: Friday, January 06, 2006 2:54 PM
>> To: 'Michael George Lerner'; pym...@li...
>> Subject: RE: [PyMOL] Can I use the mouse to control multiple windows?
>>
>> Michael,
>>
>> Of course -- use ansynchrous Python threads to automate the
>> process.  For example:
>>
>> pymol test.pdb -l send.py &
>> pymol test.pdb -l receive.py
>>
>> with the scripts below.  Note use of the lowercase "L" option
>> to launch PyMOL Python scripts in their own asynchronous thread.
>>
>> Cheers,
>> Warren
>>
>> # BEGIN send.py
>>
>> from pymol import cmd
>> from time import sleep
>> import os
>>
>> last_view = cmd.get_view()
>>
>> filename = "view.txt"
>>
>> while not sleep(0.2):
>>     cur_view = cmd.get_view()
>>     if last_view != cur_view:
>>         if not os.path.exists(filename):
>>             open(filename,'w').write(str(cur_view))
>>             last_view = cur_view
>>
>> # END send.py
>>
>> # BEGIN receive.py
>>
>> from pymol import cmd
>> from time import sleep
>> import os
>>
>> filename = "view.txt"
>>
>> while not sleep(0.2):
>>     if os.path.exists(filename):
>>         try:
>>             cmd.set_view(eval(open(filename,'r').read()))
>>             os.unlink(filename)
>>         except: # if the file isn't yet complete
>>             pass
>>
>> # END receive.py
>>
>>
>> Cheers,
>> Warren
>>
>>
>> --
>> Warren L. DeLano, Ph.D.
>> Principal Scientist
>>
>> . DeLano Scientific LLC
>> . 400 Oyster Point Blvd., Suite 213
>> . South San Francisco, CA 94080 USA
>> . Biz:(650)-872-0942  Tech:(650)-872-0834
>> . Fax:(650)-872-0273  Cell:(650)-346-1154
>> . mailto:wa...@de...
>>
>>
>>> -----Original Message-----
>>> From: pym...@li...
>>> [mailto:pym...@li...] On Behalf
>> Of Michael
>>> George Lerner
>>> Sent: Friday, January 06, 2006 1:56 PM
>>> To: pym...@li...
>>> Subject: [PyMOL] Can I use the mouse to control multiple windows?
>>>
>>>
>>> Longshot, but ..
>>>
>>> I'm looking at a structure under two different sets of
>> conditions, so
>>> I have two PyMOL windows open.  I'm constantly get_view and
>>> set_view[*] to synchronize the two windows.  Is there some
>> way to set
>>> things up so that I can drag things around in one window
>> and have the
>>> scene in the other window automatically follow along?
>>>
>>> Thanks,
>>>
>>> -michael
>>>
>>> [*] actually, I'm a bit lazier than that .. I now have this
>> run via my
>>> .pymolrc:
>>>
>>> VIEW_FILENAME = '/tmp/currentview.txt'
>>> def gv():
>>>      '''write current view to a file (default
>> /tmp/currentview.txt)'''
>>>      # '...%s...'%VIEW_FILENAME doesn't end up as gv.__doc__
>>>      f =  file(VIEW_FILENAME,'w')
>>>      f.write(str(cmd.get_view()))
>>>      f.close()
>>> def sv():
>>>      '''read current view from a file (default
>>> /tmp/currentview.txt)'''
>>>      # '...%s...'%VIEW_FILENAME doesn't end up as sv.__doc__
>>>      f = file(VIEW_FILENAME)
>>>      cmd.set_view(f.read())
>>>      f.close()
>>> cmd.extend('gv',gv)
>>> cmd.extend('sv',sv)
>>>
>>>
>>> so I can type 'gv' in one window and 'sv' in the other.
>>>
>>> --
>>> www.umich.edu/~mlerner |                        _  |Michael Lerner
>>> This isn't a democracy;| ASCII ribbon campaign ( ) |   Michigan
>>> it's a cheer-ocracy.   |  - against HTML email  X  |  Biophysics
>>> -Torrence,  Bring It On|                       / \ | mlerner@umich
>>>
>>>
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>>>
>
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