RE: [PyMOL] translating and rotating protein in space

[Warren D. <wa...@de...>]

Vanessa,

You're missing commas, and you need to issue the command in the model
frame of reference (camera frame of reference is the default):

translate [-14.911, -23.457, -1.534], camera=3D0

\
Cheers,
Warren

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Warren L. DeLano, Ph.D.                    =20
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> -----Original Message-----
> From: pym...@li...=20
> [mailto:pym...@li...] On Behalf Of=20
> Vanessa Oklejas
> Sent: Wednesday, December 14, 2005 4:36 PM
> To: pym...@li...
> Subject: [PyMOL] translating and rotating protein in space
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> Hi all,
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> I would like to translate and rotate a protein in pymol such=20
> that the pdb coordinates place the center at a specific atom=20
> in the pdb structure.  For example,  if the atom of interest=20
> has the coordinates
> [14.911 23.457 1.534], then I would the pdb coordinates to be [0 0 0].
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> I've tried to use the "translate" keyword from the command line:
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>  >> translate [-14.911 -23.457 -1.534]
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> However I get the following error message:
> Traceback (most recent call last):
>    File "C:\Program Files\DeLano
> Scientific\PyMOL/modules\pymol\parser.py", line 188, in parse
>      result=3Dapply(kw[nest][0],args[nest],kw_args[nest])
>    File "C:\Program Files\DeLano
> Scientific\PyMOL/modules\pymol\editing.py", line 1126, in translate
>      vector =3D [float(vector[0]),float(vector[1]),float(vector[2])]
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> Any help out there?
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> Muchos Gracias,
> Vanessa
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