I have three intramolecular tunnels in three pymol session (.pse) files. Two .pse files are corresponding to the same snapshot in molecular dynamics. The third .pse file is
for a different snapshot. I want to merge these .pse files using commands like
The problem is the third.pse file which is corresponding to a different snapshot in molecular dynamics is not aligning properly if I do like above. Could anyone please advise
me on how to align all the three .pse files into one merged .pse file? I highly appreciate your help.