I'm sorry for the news.. I did not know about DeLano's death ... in November of 2009, I read: I did not know about the "Open Source PyMOL Fellowship projects" of which Jared has spoken, so I made a web search, finding this
web page, and so the news, with the date ... I'm Sorry.
Yes, Bob, I never used that button to "replay to all", sorry! I'm glad to meet you, Bob, and I'm happy to hear that there was cooperation between you and DeLano. I accidentally discovered PyMOL. Nobody has never mentioned both
this opensource programs, PyMOL and Jmol, to the students at my Faculty, before to discover them from me, as well as nobody has never talked about everything on which I'm applying by myself as total self-taught but, surfing the web is a good school, and I saw that, at international level, there are development groups as you, which work on it, and there are publications in this area on PubMed, too. In Pisa I discovered now the Scientific Visualization Unit at CNR (SciVis
), and this is a very good news for me, because it gives me a justification to my efforts in this context. I have learned by myself scripting and what is necessary to bring the 3D chemistry on the web ..., and this only thanks to the web resources and the opensource, to whom I am grateful.
I didn't know existed fellowships for this, so the news is totally new for me: thanks Jared! I'd like to see enhanced this area, because I found it rather useful for descriptions, although I would not totally deviate from the research on pharmaceutics ... I like all this areas, Computational Chemistry, pharmaceutical synthesis and Molecular Biology (this latter is my address, chosen for my degree in Pharmaceutical Chemistry and Technology at Faculty of Pharmacy of Pisa University), and would be great merge them together with a PhD. I would like to know of any possibility!
I will send the email again, Bob: no, it hasn't an attached 1crn; I have attached 2 files, one of which is the pdf exported from my script (to show you the size of the file and the output, which needs no-polar hydrogens
to be removed yet), and the other attached file is a zip file with a .tex source, which makes use of media9 LaTeX package instead of movie15, because I proposed you (in that email) to replace movie15 with media9, in the source code of Jmol idtf exporter, being movie15 obsolete, as the LaTeX log file says, compiling 3 times the tex file (media9 requires that the source is compiled two times instead).
@ Jared: Yeah, I wanted to know what were all the files affected by that function, to see if I could figure out how to implement the PyMOL idtf exporter, thanks.
A big salute and thank you for the information,