Dear Amna (?),

2012/11/11 amna khan <>
i want to calculate the electron density maps for my docked protein from autodock4.2, when i load. fld.maps file generated by autodock and my docked protein at same time , no maps are generated.

1. electron density maps are calculated from experimental data and model phases. No computer program will ever give you any (real) electron density. I think you are confusing the terms here.

2. Are you trying to dock a ligand, or dock two proteins together?  There is a very nice plugin ( by Daniel Seeliger. I would use that.

Hope this helps

Folmer Fredslund

please help

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Folmer Fredslund