Thanks alot. Bond works finw
I'd like just to ask what about geometry optimisation of the new structure
E.g I want create 5memb imidazole ring where the 2 adj atoms are apart from 1.5 A from each other.
When I've create new bond by bond command new ring look like 6memb ( like benzol) because of long distance between adj atoms.
How I could optimise geometry of the new mollecule? Have pymol some built-in functions like conformational search be means of monte carlo or energy minimisation ?
you could have guessed it: http://pymolwiki.org/index.php/BondOn 01/27/2012 09:11 AM, James Starlight wrote:
Dear PyMol users!
I need to create NEW covalent bond between two adjacent atoms. How this
could be done in PyMOl?
The atoms must both be within the same object.
MPI for Developmental Biology