Hi Chandan,

Just use:

hide lines

If you then 'show spheres' you'll only have the arrangement. You can then use 'set sphere_scale,0.3' to scale down the sphere radii to 30%.

And don't forget to check out the manual  ;)

Hope it helps,


On Sep 30, 2010 7:00 AM, "Chandan Choudhury" <iitdckc@gmail.com> wrote:

Hello all !!

Is it possible to hide bonds in pymol. I want to visualize only the atoms' arrangement, not how is it connected.

Chandan kumar Choudhury
NCL, Pune

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