When I opened a pdb file generated as molecular replacement result by Phaser, my protein is shown outside of unit cell. Does anyone know why this might happen? I also tried supercell command, but still can not find one unit cell that will wrap around the structure.
I also run MR with EPMR, and my protein is inside of unit cell. I want compare solutions from different programs to figure out if both programs are finding my proteins at same location since I'm suppose to have 10 monomers per unit cells and neither program can find all ten copies.
Fei Cai, Ph.D.
DOE Joint Genome Institute/LBNL Genomics Division
2800 Mitchell Drive, B400-445U,
Walnut Creek, CA 94598-1632, USA