Hey Saeid,

use the 'super' command.  Type

  super protein1, protein2

For more information, check teh wiki.


Andreas


On Tue, Dec 8, 2009 at 7:07 AM, saeid mirzaei <smirzaei56@yahoo.com> wrote:
Hi everyone,
 
could some one tell me I can use Pymol for superimposing two protein or not if so how can I use it?
 
Thanks,


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