Dear Pymol Users,
i am working with some pdb files with no secondary structures assignments embedded on it. Then when i try to see my molecules on cartoon diagrams, i see the secondary structure different to another programs, VMD for example.
I used the command alter (for example alter 10-34/, ss='S'), and i am capable of assign the secondary structure that i want but this is just temporary. If i save the molecule, when i oppen it again it has the original secondary structure and no the altered one.
Can anyone help me about this??? I really prefer pymol instead other programs for visualization!

Paola Beassoni - PhD
Dpto. Biologia Molecular - FCEFQyN
Universidad Nacional de Rio Cuarto
Río Cuarto - Argentina
00-54-358-4676232 (Fax)