Hi all,

I'm trying to build pymol-svn-3924 on a CentOS 5.5 x86_64 box.

The "distutil" way doesn't work with Intel's compiler's 10.1 (work's with GNU) :

# export CC='icc'; export CXX='icpc'; export F77='ifort'
# python setup.py build
# python setup.py install
# python setup2.py install
# ./pymol
Traceback (most recent call last):
  File "/usr/lib64/python2.4/site-packages/pymol/__init__.py", line 184, in ?
    import pymol
  File "/usr/lib64/python2.4/site-packages/pymol/__init__.py", line 472, in ?
    import _cmd
ImportError: /usr/lib64/python2.4/site-packages/pymol/_cmd.so: undefined symbol: __builtin_object_size

On the other hand, the "GNU autotools" way doesn't work either with any compiler :
- 1) "ce_types.h" is not found when compiling Cmd.c (I just had to fix the include path to look in the correct location)
- 2) After completing the compile process, the resulting "libpymol.so.0.0.0" is not "fully" operational :

# /usr/xtal/pymol/bin/pymol
Traceback (most recent call last):
  File "/usr/xtal/pymol/modules/launch_pymol.py", line 32, in ?
    import pymol
  File "/usr/xtal/pymol/modules/pymol/__init__.py", line 472, in ?
    import _cmd
ImportError: /usr/xtal/pymol/modules/pymol/_cmd.so: undefined symbol: findBest


Anyone can help me to compile pymol with Intel compilers ?
Regards,
Rafael.