Dear all,
I ran into a problem with double conformations when using pymol. I have a loop with two (quite distinct) alternate conformations. I display one of the alternate conformation for each of the three residues. However, pymol does not display them connected, which is why I connected them manually. What I actually wanted to do is show them as ribbons. However, if I try to use the show ribbon utility after I connect them, pymol does not show a connected ribbbon.
I have not found a way around this problem yet, but I thought that this might be a generally important point which could be improved in pymol.
Florian Schmitzberger
Department of Biochemistry
University of Cambridge
80 Tennis Court Road
CB2 1GA Cambridge
Tel: +44 1223 766029