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[pyblio] bib file / no refs displayed/ pybliographer: warning: unable to convert `\textit'
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From: Sam M. <sam...@no...> - 2011-12-22 18:47:12
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Hi I've been using pybliographer for years on linux, but am having trouble displaying my database (bibtex *.bib file) since upgrading to ubuntu 11.10 using the gnome 3 desktop. The file appears to load by the pybliographic window stays blank. Loading from the terminal returns a GTK warning: smc@nakrasana:~$ pybliographic (pybliographer:9283): Gtk-WARNING **: Unable to locate theme engine in module_path: "pixmap", (pybliographer:9283): Gtk-WARNING **: Unable to locate theme engine in module_path: "pixmap", (pybliographer:9283): Gtk-WARNING **: Unable to locate theme engine in module_path: "pixmap", (pybliographer:9283): Gtk-WARNING **: Unable to locate theme engine in module_path: "pixmap", This is Pybliographic 1.2.14 [Python 2.7.2, Gtk 2.24.6, PyGTK 2.24.0] It looks to me like there is some dependency that was unmet when I installed pybliographer from synaptic software manager. I tried a reinstall with no success. So I uninstalled the package with sysnaptic, and tried a reinstall from the command line: smc@nakrasana:~$ sudo apt-get install pybliographer Reading package lists... Done Building dependency tree Reading state information... Done The following extra packages will be installed: libbonoboui2-0 libbonoboui2-common libgnomecanvas2-0 libgnomecanvas2-common libgnomeui-0 libgnomeui-common librecode0 python-bibtex python-gnome2 python-pyorbit Suggested packages: python-gnome2-doc python-pyorbit-dbg The following NEW packages will be installed: libbonoboui2-0 libbonoboui2-common libgnomecanvas2-0 libgnomecanvas2-common libgnomeui-0 libgnomeui-common librecode0 pybliographer python-bibtex python-gnome2 python-pyorbit 0 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/2,525 kB of archives. After this operation, 8,929 kB of additional disk space will be used. Do you want to continue [Y/n]? ^Csmc@nakrasana:~$ smc@nakrasana:~$ sudo apt-get install pybliographer Reading package lists... Done Building dependency tree Reading state information... Done The following extra packages will be installed: libbonoboui2-0 libbonoboui2-common libgnomecanvas2-0 libgnomecanvas2-common libgnomeui-0 libgnomeui-common librecode0 python-bibtex python-gnome2 python-pyorbit Suggested packages: python-gnome2-doc python-pyorbit-dbg The following NEW packages will be installed: libbonoboui2-0 libbonoboui2-common libgnomecanvas2-0 libgnomecanvas2-common libgnomeui-0 libgnomeui-common librecode0 pybliographer python-bibtex python-gnome2 python-pyorbit 0 upgraded, 11 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/2,525 kB of archives. After this operation, 8,929 kB of additional disk space will be used. Do you want to continue [Y/n]? Y Selecting previously deselected package libgnomecanvas2-common. (Reading database ... 215011 files and directories currently installed.) Unpacking libgnomecanvas2-common (from .../libgnomecanvas2-common_2.30.3-1_all.deb) ... Selecting previously deselected package libgnomecanvas2-0. Unpacking libgnomecanvas2-0 (from .../libgnomecanvas2-0_2.30.3-1_amd64.deb) ... Selecting previously deselected package libbonoboui2-common. Unpacking libbonoboui2-common (from .../libbonoboui2-common_2.24.5-0ubuntu1_all.deb) ... Selecting previously deselected package libbonoboui2-0. Unpacking libbonoboui2-0 (from .../libbonoboui2-0_2.24.5-0ubuntu1_amd64.deb) ... Selecting previously deselected package libgnomeui-common. Unpacking libgnomeui-common (from .../libgnomeui-common_2.24.5-1_all.deb) ... Selecting previously deselected package libgnomeui-0. Unpacking libgnomeui-0 (from .../libgnomeui-0_2.24.5-1_amd64.deb) ... Selecting previously deselected package librecode0. Unpacking librecode0 (from .../librecode0_3.6-17_amd64.deb) ... Selecting previously deselected package python-pyorbit. Unpacking python-pyorbit (from .../python-pyorbit_2.24.0-6ubuntu1_amd64.deb) ... Selecting previously deselected package python-gnome2. Unpacking python-gnome2 (from .../python-gnome2_2.28.1-3_amd64.deb) ... Selecting previously deselected package python-bibtex. Unpacking python-bibtex (from .../python-bibtex_1.2.5-1build1_amd64.deb) ... Selecting previously deselected package pybliographer. Unpacking pybliographer (from .../pybliographer_1.2.14-3_all.deb) ... Processing triggers for desktop-file-utils ... Processing triggers for gnome-menus ... Processing triggers for bamfdaemon ... Rebuilding /usr/share/applications/bamf.index... Processing triggers for man-db ... Setting up libgnomecanvas2-common (2.30.3-1) ... Setting up libgnomecanvas2-0 (2.30.3-1) ... Setting up libbonoboui2-common (2.24.5-0ubuntu1) ... Setting up libbonoboui2-0 (2.24.5-0ubuntu1) ... Setting up libgnomeui-common (2.24.5-1) ... Setting up libgnomeui-0 (2.24.5-1) ... Setting up librecode0 (3.6-17) ... Setting up python-pyorbit (2.24.0-6ubuntu1) ... Setting up python-gnome2 (2.28.1-3) ... Setting up python-bibtex (1.2.5-1build1) ... Processing triggers for python-central ... Setting up pybliographer (1.2.14-3) ... update-alternatives: using /usr/bin/bibtex.pybliographer to provide /usr/bin/pybtex (pybtex) in auto mode. Processing triggers for libc-bin ... ldconfig deferred processing now taking place Processing triggers for python-support ... smc@nakrasana:~$ I get the same warmings but another clue: smc@nakrasana:~$ pybliographic (pybliographer:10467): Gtk-WARNING **: Unable to locate theme engine in module_path: "pixmap", (pybliographer:10467): Gtk-WARNING **: Unable to locate theme engine in module_path: "pixmap", (pybliographer:10467): Gtk-WARNING **: Unable to locate theme engine in module_path: "pixmap", (pybliographer:10467): Gtk-WARNING **: Unable to locate theme engine in module_path: "pixmap", This is Pybliographic 1.2.14 [Python 2.7.2, Gtk 2.24.6, PyGTK 2.24.0] pybliographer: warning: unable to convert `\textit' pybliographer: warning: unable to convert `\textit' pybliographer: warning: unable to convert `\textit' pybliographer: warning: unable to convert `\protect' So I realise that where I previously edited references in pybliographer using the LaTex option, the LaTex commands that were saved with those reference entries are now causing a problem on reloading .... This seems to be a problem with a later version of pybliographer. How to solve this? After some googling for solutions, I find my only option is to pester the maillist. Any suggestions gratefully received. Best fishes Sam -- Sam McClatchie, Supervisory oceanographer, Fisheries oceanography Southwest Fisheries Science Center, NOAA, 8604 La Jolla Shores Drive La Jolla, CA 92037-1508, U.S.A. email<Sam...@no...> Cellular: 858 752 8495 Research home page<www.fishocean.info> /\ ...>><xX(¡> //// \\\\ <¡)Xx><< ///// \\\\\\ ><(((¡> >><(((¡> ...>><xX(¡>O<¡)Xx><< |
