Re: [pyblio] no access to medline/pubmed

[Vitaly V. G. <vi...@ni...>]

Yes, it is the most likely explanation. Other applications work fine, 
e.g., jabref, so they probably know what happened.

Vitaly

On 09/13/2011 02:58 AM, Zoltan Kota wrote:
> Hi,
>
> On Tue, Sep 6, 2011 at 10:19 PM, Vitaly V. Ganusov
> <vit...@gm...>  wrote:
>> I cannot download references from medline anymore - the query returns
>> status that "Query return no results" no matter what I search. It used
>> to work fine until recently.
>>
>> I run Ubuntu 10.04 LTS, version 1.2.12
>
> Hm. I think it is not an Ubuntu issue. The same for me under Fedora.
> The URL pyblio has used gives the message 'Wrong DB name' upon medline
> query. The links we have used:
> query_url = 'http://www.ncbi.nlm.nih.gov/entrez/utils/pmqty.fcgi'
> fetch_url = 'http://www.ncbi.nlm.nih.gov/entrez/utils/pmfetch.fcgi'
>
> So, maybe these urls don't work anymore? Does anybody have any
> information regarding this ussue?
>
> I'm afraid we have to change the url (eutils?), and update the code.
>
> Zoltan

-- 
Vitaly V. Ganusov
Assistant Professor
M409 Walters Life Sciences
Department of Microbiology
University of Tennessee
Knoxville, TN 37996-0845
USA
Phone: +1 865 974-4547
FAX:   +1 865 974-4007
http://web.bio.utk.edu/ganusov/index.html