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From: Kai R. <kr...@us...> - 2004-08-02 12:19:02
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Date: Monday August 2, 2004 @ 5:18 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData Update of /cvsroot/psidev/psi/psi-ms/xml/mzData In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv28605 Added Files: example.xml Log Message: Example file valid to version 1.00 |
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From: Kai R. <kr...@us...> - 2004-07-30 14:57:53
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Date: Friday July 30, 2004 @ 7:57 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData Update of /cvsroot/psidev/psi/psi-ms/xml/mzData In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv24983 Modified Files: mzdata.xsd Log Message: The fruits of the jamboree at the EBI July 26-30: It uses a variant of Randy's all-attribute CV elements, and has had all but the most simple enumerations removed. The structure is somewhere between the post-Nice version and the 'all attribute' variant recently sent round by Randy. |
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From: Kai R. <kr...@us...> - 2004-07-27 10:26:40
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Date: Tuesday July 27, 2004 @ 3:26 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData Update of /cvsroot/psidev/psi/psi-ms/xml/mzData In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv26652 Modified Files: mzdata.xsd Log Message: Added Randall's suggestions after the Carros meeting: -removed the required attributes in the instrument's section. They are now in the CV controlled element instrParam, which is much more flexible for future extension regarding new instruments. -also removed the choice between an explicit, element-base, display of the m/z data and the base64 display of this data. |
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From: Kai R. <kr...@us...> - 2004-02-19 11:23:08
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Date: Thursday February 19, 2004 @ 3:12 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/view Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/view In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv32407/src/java/org/psi/ms/view Modified Files: AbstractMZDataObject.java AdminContactPersonData.java AdminData.java AnalyzerData.java DetectorData.java InstrumentCommonSettingsData.java ProcessingMethodData.java SourceData.java TestData.java Log Message: Optimization: Boolean.TRUE instead of new Boolean(true) |
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From: Kai R. <kr...@us...> - 2004-02-19 11:22:35
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Date: Thursday February 19, 2004 @ 3:12 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/swing Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/swing In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv32279/src/java/org/psi/ms/swing Modified Files: AdminPanel.java Log Message: Bugfix: .equals("") instead of == "" |
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From: Kai R. <kr...@us...> - 2004-01-28 18:26:35
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Date: Wednesday January 28, 2004 @ 10:25 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy/tools/xml Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy/tools/xml In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv22604/expasy/tools/xml Added Files: PullReader.java Log Message: Eric's pull-parser framework. |
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From: Kai R. <kr...@us...> - 2004-01-28 18:26:06
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Date: Wednesday January 28, 2004 @ 10:24 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy/tools/xml Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy/tools/xml In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv22516/expasy/tools/xml Log Message: Directory /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy/tools/xml added to the repository |
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From: Kai R. <kr...@us...> - 2004-01-28 18:25:59
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Date: Wednesday January 28, 2004 @ 10:24 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy/tools Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy/tools In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv22494/expasy/tools Log Message: Directory /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy/tools added to the repository |
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From: Kai R. <kr...@us...> - 2004-01-28 18:25:53
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Date: Wednesday January 28, 2004 @ 10:24 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv22477/expasy Log Message: Directory /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/expasy added to the repository |
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From: Kai R. <kr...@us...> - 2004-01-28 18:25:34
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Date: Wednesday January 28, 2004 @ 10:24 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv22329 Added Files: maven.xml Log Message: Defines a Maven preGoal for generating the XML schema's documentation. |
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From: Kai R. <kr...@us...> - 2004-01-28 18:24:45
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Date: Wednesday January 28, 2004 @ 10:23 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv22111 Modified Files: build.xml project.properties project.xml Log Message: Added libraries needed for Eric's pull-parser framework. |
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From: Kai R. <kr...@us...> - 2004-01-28 18:23:05
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Date: Wednesday January 28, 2004 @ 10:21 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/xdocs Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/xdocs In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv21719 Added Files: concept.xml index.xml navigation.xml Log Message: Added some documentation (not complete yet). |
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From: Kai R. <kr...@us...> - 2004-01-28 18:22:34
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Date: Wednesday January 28, 2004 @ 10:21 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/xdocs Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/xdocs In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv21665/xdocs Log Message: Directory /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/xdocs added to the repository |
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From: Kai R. <kr...@us...> - 2004-01-27 12:16:00
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Date: Tuesday January 27, 2004 @ 4:15 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/lib Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/lib In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv23623 Added Files: commons-collections-2.1.jar commons-lang-1.0.1.jar Log Message: This library is needed by Eric's pull-parser. |
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From: Kai R. <kr...@us...> - 2004-01-27 12:05:45
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Date: Tuesday January 27, 2004 @ 4:04 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/plugins/MascotGeneric Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/plugins/MascotGeneric In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv21535/MascotGeneric Added Files: .cvsignore Log Message: Ignore all temporal files generated for the plugins. |
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From: Kai R. <kr...@us...> - 2004-01-27 12:05:45
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Date: Tuesday January 27, 2004 @ 4:04 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/plugins/dta Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/plugins/dta In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv21535/dta Added Files: .cvsignore Log Message: Ignore all temporal files generated for the plugins. |
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From: Kai R. <kr...@us...> - 2004-01-27 12:04:22
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Date: Tuesday January 27, 2004 @ 4:03 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv21364 Modified Files: build.xml Log Message: Forget the "clean" target call for the Sashimi plugin. |
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From: Kai R. <kr...@us...> - 2004-01-27 11:59:37
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Date: Tuesday January 27, 2004 @ 3:58 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/test/org/psi/ms/test Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/test/org/psi/ms/test In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv20001 Removed Files: TestDtaReader.java Log Message: Removed the TestDtaReader as DtaReader moved to the plugin dta. |
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From: Kai R. <kr...@us...> - 2004-01-27 11:54:59
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Date: Tuesday January 27, 2004 @ 3:53 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/model Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/model In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv18907 Removed Files: AcqDescList.java Raw.java Log Message: No longer used. |
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From: Kai R. <kr...@us...> - 2004-01-27 11:54:03
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Date: Tuesday January 27, 2004 @ 3:53 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/converter Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/converter In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv18683 Removed Files: DtaReader.java DtaSetConverter.java Log Message: These classes moved to the dta plugin. |
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From: Kai R. <kr...@us...> - 2004-01-27 11:47:59
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Date: Tuesday January 27, 2004 @ 3:47 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/plugins/dta Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/plugins/dta In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv17383/plugins/dta Modified Files: build.xml Log Message: All the source-code is now compiled for Java 1.4 only. |
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From: Kai R. <kr...@us...> - 2004-01-27 11:47:58
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Date: Tuesday January 27, 2004 @ 3:47 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/plugins/MascotGeneric Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/plugins/MascotGeneric In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv17383/plugins/MascotGeneric Modified Files: build.xml Log Message: All the source-code is now compiled for Java 1.4 only. |
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From: Kai R. <kr...@us...> - 2004-01-27 11:47:58
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Date: Tuesday January 27, 2004 @ 3:47 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv17383 Modified Files: build.xml project.properties Log Message: All the source-code is now compiled for Java 1.4 only. |
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From: Kai R. <kr...@us...> - 2004-01-26 16:51:45
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Date: Monday January 26, 2004 @ 8:50 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/test/org/psi/ms/helper Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/test/org/psi/ms/helper In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv16731 Added Files: TestUtils.java Log Message: Tests for the Utils class. |
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From: Kai R. <kr...@us...> - 2004-01-26 16:51:23
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Date: Monday January 26, 2004 @ 8:50 Author: krunte http://cvs.sourceforge.net/cgi-bin/viewcvs.cgi/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/helper Update of /cvsroot/psidev/psi/psi-ms/xml/mzData/converter/src/java/org/psi/ms/helper In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv16557 Modified Files: Utils.java Log Message: This is now hopefully the correct implementation of the float-list-to-base64 conversion. |
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