Re: [Psidev-qc-dev] Upcoming teleconference 2/6

[Bittremieux, W. <wbi...@he...>]

Dear colleagues,

You can find the meeting notes of yesterday's teleconference here: https://github.com/HUPO-PSI/mzQC/blob/master/meeting_notes/20210602_telco.md

Please note the following schedule for finalization of the specification document:

  *   Until Wednesday June 9, 2021: Mathias, Wout, Dave finalize the specification document and do final checks.
  *   Until Wednesday June 16, 2021 (next teleconference): Send the specification document to the QC mailing list and everyone gives final feedback!

Best,
Wout
________________________________
From: Bittremieux, Wout
Sent: Tuesday, June 1, 2021 19:45
To: psi...@li... <psi...@li...>
Subject: Upcoming teleconference 2/6

Dear colleagues,

We have our next teleconference tomorrow, Wednesday June 2, at 14h00 GMT (15h00 London, 16h00 Western Europe, 7h00 San Diego).

Note that we have decided to meet bi-weekly to finish the specification document and manuscript(s) discussed during the Spring Meeting.

You can connect to our teleconference on Zoom through the following link: https://uchealth.zoom.us/j/92419363577?pwd=WVp5Q3FXNU9vaVdJT0ZNRllXWlN3Zz09
(Password: 012575)

Agenda items:

- To ASMS workshop or not to ASMS workshop? Apply here<https://applications-and-award-nominations.formstack.com/forms/asms_workshop_independent_2021> by July 1.
- Specification document updates (Mathias): Sections 5.1 (mzML) & 5.4 (USI), related issue 130<https://github.com/HUPO-PSI/mzQC/issues/130>.
- Examples
    - Combination of mzML and mzQC (issue 56<https://github.com/HUPO-PSI/mzQC/issues/56>; section 5.1)
    - nativeID and USI (issue 56<https://github.com/HUPO-PSI/mzQC/issues/56>; section 5.4)
    - setQuality (PR 112<https://github.com/HUPO-PSI/mzQC/pull/112>)
    - QuaMeter (issue 11<https://github.com/HUPO-PSI/mzQC/issues/11>; mzQC example<https://gist.github.com/bittremieux/a3a43ce929e38fd0230005782f3c9725>)
    - mzTab (section 5.3)
    - SDRF (section 5.5)
- Semantic/syntactic validation (issue 51<https://github.com/HUPO-PSI/mzQC/issues/51>, mzqc-pylib<https://github.com/bigbio/mzqc-pylib>, specification document section 8).
    - mzqc-pylib code style

Best,
Wout