From: Wout B. <wbi...@he...> - 2020-11-19 02:03:48
|
Dear colleagues, You can find the meeting notes of today's teleconference here: https://github.com/HUPO-PSI/mzQC/blob/master/meeting_notes/20201118_telco.md Our next teleconference will be on Wednesday December 2, 2020 at **15h00 GMT** (note that this is one hour later than usual). I want to reiterate what was mentioned this morning: we are very close to being able to initiate the PSI document process. We will try to start this within the next 1.5 week, so I would like to request that everyone has a final thorough look at the specification process before the Thanksgiving weekend next week: https://docs.google.com/document/d/132F3MBgDJgtFlXxDZhpJ1oHGbKL8pT6dk9fvL55L5_M/edit?usp=sharing I currently have only two minor comments for Mathias to address (update figure 1 and clarify a single sentence), so I think we are very close! Following up on our discussion from this morning, we should also create new example files. I have updated the relevant issue #11 (https://github.com/HUPO-PSI/mzQC/issues/11). Could people try to come up with the following example files or indicate any issues otherwise: - single input file (QC-Calculator @mwalzer) - multiple input files (PTXQC @cbielow: derived from MaxQuant's proteins.txt file). - metabolomics (@rsalek) Possible extra files? - QuaMeter (@dtabb73) - Yamato / SwaMe (@PaulBrack) Thank you everyone for your valiant efforts. Best, Wout On 17/11/2020 18:26, Wout Bittremieux via Psidev-qc-dev wrote: > Dear colleagues, > > We have our next teleconference tomorrow, Wednesday November 18, at > 14h00 GMT (14h00 London, 15h00 Western Europe, 16h00 Cape Town, 6h00 San > Diego). > > You can connect to our teleconference on Zoom through the > following link: > https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fuchealth.zoom.us%2Fj%2F92419363577%3Fpwd%3DWVp5Q3FXNU9vaVdJT0ZNRllXWlN3Zz09&data=04%7C01%7Cwout.bittremieux%40uantwerpen.be%7C87d55b4b499941685f5008d88b6979c6%7C792e08fb2d544a8eaf72202548136ef6%7C0%7C0%7C637412632876171562%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=AjdU8FJMz4Ih4cxcbTSsy21aeSfq%2BAdqFjCl1SlEXYI%3D&reserved=0 > > (Password: 012575) > > Agenda items: > > - Companion documents: Which one do we already have > (https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2FHUPO-PSI%2FmzQC%2Ftree%2Fmaster%2Fspec_doc%2Fcompanion_docs&data=04%7C01%7Cwout.bittremieux%40uantwerpen.be%7C87d55b4b499941685f5008d88b6979c6%7C792e08fb2d544a8eaf72202548136ef6%7C0%7C0%7C637412632876171562%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=eemJgISORrAFJ8biBRJrOjdNwWZ%2FTJGE4eNp2iIT2PI%3D&reserved=0)? > Do they need to be updated to be in line with the specification > document? Which additional companion documents do we need (see > specification document page 31-32)? > > - Example files: Provide example files covering various scenarios and > use cases. Generate with tools and/or craft by hand. What is the status? > > - Specification document & CV: Follow-up on discussion points raised > last week and comments in the specification document. > > Please communicate other agenda items to the mailing list. > > Best, > Wout > > > > _______________________________________________ > Psidev-qc-dev mailing list > Psi...@li... > https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Flists.sourceforge.net%2Flists%2Flistinfo%2Fpsidev-qc-dev&data=04%7C01%7Cwout.bittremieux%40uantwerpen.be%7C87d55b4b499941685f5008d88b6979c6%7C792e08fb2d544a8eaf72202548136ef6%7C0%7C0%7C637412632876171562%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=fQVBArelB%2BFEzZQ5PVJBCFMPfmO6%2FBWlUpnZ1Db0p2U%3D&reserved=0 > |