[Psidev-qc-dev] Example of per-spectrum quality metric

[Tabb, D. P. [<dt...@su...>]

Hi, all.

Mathias reminded me that I had not yet sent this paper around.  We mentioned the value of mzML NativeID as a way to anchor quality metrics to a particular MS/MS scan.  I argued that estimating "identifiability" for a spectrum was one use case in which this anchoring would be useful.  Ze-Qiang Ma, a talented researcher I trained back at Vanderbilt, once published a paper on our approach to use our DirecTag sequence tagging engine to assess which spectra are most likely to be identified in a RAW file.  While DirecTag is maintained code, the ScanRanker interface is not.  Just the same, I am sure we could knock together a script to translate a .tags file plus an .mzML file into a mzQC JSON string.

Thanks,
Dave
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