Menu
▾
▴
Re: [Psidev-qc-dev] Upcoming teleconference Thursday 18/04
|
From: Tabb, D. P. [<dt...@su...> - 2019-04-18 15:27:01
|
Hi, all. My immediate memories from the last hour give this report on the to-do roster: - Paul: Finalize and share the example mzQC snippet containing SWATH metrics in a matrix. Paul has sent around an example of mzQC for SWATH metrics in a message today. Paul also created an example of an iRT-based data table metric, but we are unsure of its present whereabouts. - Timo/Mathias/Wout: Finalize and share the example mzQC file demonstrating internal references. We are currently unsure about this implementation because it uses a proposed but not formally accepted JSON mechanism. - Dave/Timo: Contact Meena Choi in April about mzQC export in MSstats/MSstatsQC. Timo can address this in person with her when he's visiting Boston next month for the computational proteomics course. - Dave: Contact Oliver Fiehn to inquire how we can support GC-MS metabolomics in mzQC and advertise this to the metabolomics community. Dave has set aside time on April 23rd for this purpose. - Mathias: Align source data for CVs with Yasset's metadata efforts. Mathias suggested this wasn't completed. And LOGO! I sent an image to the Google Hangout that Paul Brack created to humor my silly concept for the mzQC logo. I like it, yes, even the 3D version! We had a bit more discussion about synchronizing schema and cv versions (Julian added a pull request for a new CV number). Dave pledged to update his JSON example for Lizex's 1091_Pool_start IDFree metrics on April 30th. WOUT, what day is our next telecon? Now let's go eat chocolate and jelly beans! Thanks, Dave -----Original Message----- From: Wout Bittremieux <wo...@uw...> Sent: Tuesday, April 9, 2019 9:36 PM To: psi...@li... Subject: [Psidev-qc-dev] Upcoming teleconference Thursday 18/04 Dear colleagues, This is a reminder that our next teleconference is scheduled for Thursday, April 18th, at 14h00 GMT (15h00 London, 16h00 Western Europe / Cape Town, 7h00 Seattle, 22h00 Beijing). I will be on holiday from tomorrow until the end of next week and won't be able to send the regular notification or attend the meeting, hence this early reminder. You can connect to our teleconference on Google Hangouts through the following link: https://hangouts.google.com/group/taNzRy6ELMDK9wbk2 I propose the following agenda items to follow up on the action points from the spring meeting (https://github.com/HUPO-PSI/mzQC/blob/master/meeting_notes/20190318_CapeTown.md): - Paul: Finalize and share the example mzQC snippet containing SWATH metrics in a matrix. - Timo/Mathias/Wout: Finalize and share the example mzQC file demonstrating internal references. - Dave/Timo: Contact Meena Choi in April about mzQC export in MSstats/MSstatsQC. Timo can address this in person with her when he's visiting Boston next month for the computational proteomics course. - Dave: Contact Oliver Fiehn to inquire how we can support GC-MS metabolomics in mzQC and advertise this to the metabolomics community. - Mathias: Align source data for CVs with Yasset's metadata efforts. (- Wout: Update the JSON schema to have a list of units.) (- Wout: Add new checks to the semantic validator (#51).) (Unfortunately I haven't had time yet to address these final two action items. I have a small example file implementing internal references using JSON pointers, but it's not fully ready to be shared yet.) Thanks, Wout _______________________________________________ Psidev-qc-dev mailing list Psi...@li... https://lists.sourceforge.net/lists/listinfo/psidev-qc-dev [http://cdn.sun.ac.za/100/ProductionFooter.jpg]<http://www.sun.ac.za/english/about-us/strategic-documents> The integrity and confidentiality of this email are governed by these terms. Disclaimer<http://www.sun.ac.za/emaildisclaimer> Die integriteit en vertroulikheid van hierdie e-pos word deur die volgende bepalings bereël. Vrywaringsklousule<http://www.sun.ac.za/emaildisclaimer> |
