[Psidev-pi-dev] New version 4.1.10 of psi-ms.obo

[mayerg97 <ger...@ru...>]

Dear proteomics/metabolomics community,

the new version 4.1.10 of the psi-ms.obo file can be downloaded from
https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo
It contains new terms for specifying lipidomics tools in mzTab-L.

New CV terms in version 4.1.10 of psi-ms.obo:
=============================================
[Term]
id: MS:1002962
name: mean
def: "The arithmetic mean." [PSI:PI]
is_a: MS:1002882 ! study variable average function

[Term]
id: MS:1002963
name: variation coefficient
def: "The coefficient of variation." [PSI:PI]
is_a: MS:1002884 ! study variable variation function

[Term]
id: MS:1002964
name: lipidomics analysis software
def: "Lipidomics analysis software." [PSI:PI]
is_a: MS:1002878 ! small molecule analysis software

[Term]
id: MS:1002965
name: Lipid Data Analyzer
def: "Lipid Data Analyzer software for lipid quantification." 
[PMID:29058722]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002966
name: chrom format
def: "The Lipid Data Analyzer native chrom format." [PSI:PI]
is_a: MS:1000560 ! mass spectrometer file format

[Term]
id: MS:1002967
name: LipidHunter
def: "Software for identification of phospholipids by high-throughput 
processing of LC-MS and shotgun lipidomics datasets." [PMID:28753264]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002968
name: LipidXplorer
def: "Software for consensual cross-platform lipidomics." [PMID:22272252]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002969
name: LipidMatch
def: "An automated workflow for rule-based lipid identification using 
untargeted high-resolution tandem mass spectrometry data." [PMID:28693421]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002970
name: Greazy
def: "Open-source software for automated phospholipid tandem mass 
spectrometry identification." [PMID:27186799]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002971
name: LipidBlast
def: "LC-MS-based lipidomics and automated identification of lipids 
using the LipidBlast in-silico MS/MS library." [PMID:28660581]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002972
name: Lipid-Pro
def: "A computational lipid identification solution for untargeted 
lipidomics on data-independent acquisition tandem mass spectrometry 
platforms." [PMID:25433698]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002973
name: LipidFinder
def: "A computational workflow for the discovery of lipids for the 
identification of eicosanoid-phosphoinositides in platelets." 
[PMID:28405621]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002974
name: LipiDex
def: "An integrated software package for high-confidence lipid 
identification." [PMID:29705063]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002975
name: LIQUID
def: "An-open source software for identifying lipids in LC-MS/MS-based 
lipidomics data." [PMID:28158427]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software

[Term]
id: MS:1002976
name: ALEX
def: "Analysis of lipid experiments, a software framework for the 
analysis of high-resolution shotgun lipidomics data." [PMID:24244551]
is_a: MS:1002964 ! lipidomics analysis software
is_a: MS:1001457 ! data processing software


Changed CV terms in version 4.1.10 of psi-ms.obo:
=================================================
No changed terms

Best Regards,
Gerhard

-- 

*--------------------------------------------------------------------*

*Dipl. Inform. med., Dipl. Wirtsch. **Inf. GERHARD MAYER*

*PhD student*

*Medizinisches Proteom-Center*

*DEPARTMENT Medical Bioinformatics*

*Building *ZKF E.055 | Universitätsstraße 150 | D-44801 Bochum

*Fon *+49 (0)234 32-29272 | *Fax *+49 (0)234 32-14554

*E-mail***ger...@ru... <mailto:ger...@ru...>

www.medizinisches-proteom-center.de 
<http://www.medizinisches-proteom-center.de/>