[Psidev-pi-dev] Release candidate 4.1.7_rc1 of psi-ms.obo

[mayerg97 <ger...@ru...>]

Dear proteomics/metabolomics community,

following are new/changed terms from the release candidate 4.1.7_rc1 of 
the psi-ms.obo file.
It contains new and changed terms for mzTab-M annotation.


New CV terms in version 4.1.7_rc1 of psi-ms.obo:
================================================
[Term]
id: MS:1002894
name: InChI key
def: "Unique chemical structure identifier for chemical compounds." 
[PMID:273343401]
xref: value-type:xsd\:string "The allowed value-type for this CV term."
is_a: MS:1001405 ! spectrum identification result details

[Term]
id: MS:1002895
name: small molecule identification attribute
def: "Compound identification information." [PSI:PI]
is_a: MS:1002694 ! single identification result attribute

[Term]
id: MS:1002896
name: compound identification confidence level
def: "Confidence level for annotation of identified compounds as defined 
by the Metabolomics Standards Initiative (MSI). The value slot can have 
the values 'Level 0' until 'Level 4'." [PMID:29748461]
xref: value-type:xsd\:string "The allowed value-type for this CV term."
is_a: MS:1002895 ! small molecule identification attribute

[Term]
id: MS:1002897
name: isotopomer peak
def: "Identifies a peak when no de-isotoping has been performed. The 
value slot reports the isotopomer peak, e.g. '2H', '13C', '15N', '18O', 
'31P'." [PSI:PI]
xref: value-type:xsd:string "The allowed value-type for this CV term."
is_a: MS:1000231 ! peak


Changed CV terms in version 4.1.7_rc1 of psi-ms.obo:
====================================================
************ Changed definition and added publication reference 
[PMID:27824832]
[Term]
id: MS:1002599
name: splash key
def: "Spectral Hash key, an unique identifier for spectra." [PMID:27824832]
xref: value-type:xsd\:string "The allowed value-type for this CV term."
is_a: MS:1001405 ! spectrum identification result details

Best Regards,
Gerhard

-- 

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*Dipl. Inform. med., Dipl. Wirtsch. **Inf. GERHARD MAYER*

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*Medizinisches Proteom-Center*

*DEPARTMENT Medical Bioinformatics*

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