[Psidev-qc-dev] Doing my homework for qcML

[David T. <dt...@su...>]

Hi, all.

In creating my hand-crafted example of qcML from QuaMeter IDFree, I've
installed Protege, an ontology viewer.  It's useful for perusing the
HUPO-PSI MS ontology (http://purl.obolibrary.org/obo/ms/4.1.2/ms.owl).

I'm a bit confused, though, in how to review the qcML ontology. At
present, I can find an OBO to download
(https://github.com/HUPO-PSI/qcML-development/raw/master/cv/v0_0_10/qc-cv.obo),
but I do not see an OWL equivalent.  Helpfully, I can simply review the
OBO in a text editor.

In particular, I am trying to determine which QC accessions each of my
IDFree metrics will represent.  Does each metric generator get a
particular series of numbers that relate to that software's outputs?
Can I reuse a metric accession from other software if my tool generates
the same values (such as the number of MS/MS scans)?

Jinmeng Jia, will you be able to share your paragraph that meets the
draft MIAPE QC standard with Weimin Zhu for him to present at
Heidelberg?  I was sorry to hear you won't be able to attend yourself.

Thanks,
Dave

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