[Psidev-qc-dev] Special requests for Heidelberg meeting

[Tabb, D. P. <dt...@su...>]

Hi, team!


We had a compact call that touched several interesting topics today.  I'll let Wout tell the whole story in the minutes, but for now I want to make a couple of requests in connection with the April 18-20 meeting in Heidelberg (draft agenda here: <https://docs.google.com/spreadsheets/d/14uyeHF9d3_E4K9Fsh5mLHwL5JUS2q49plNspwelGQ4A/view> https://docs.google.com/spreadsheets/d/14uyeHF9d3_E4K9Fsh5mLHwL5JUS2q49plNspwelGQ4A/view<https://docs.google.com/spreadsheets/d/14uyeHF9d3_E4K9Fsh5mLHwL5JUS2q49plNspwelGQ4A/view#gid=1021763599>
):


  *   First, if you haven't registered and plan to go, please go ahead to register so we have a good headcount.
  *   Second, during the latter part of Thursday morning (Apr. 19), we will be looking at the CV with an eye to what is missing, using the perspective of the metric generator, the researcher trying to publish, or the database trying to ingest a qcML object.
  *   Third, if you are a quality metric generator, you should be prepared to work up (or just present) some examples of how to express those metrics in XML during the afternoon session on April 19th.
  *   Fourth, Jinmeng, you get your very own session of two hours in the late afternoon of April 19th.  I would greatly appreciate it if you could write an example of a (long?) paragraph that we would like to see in a peer-reviewed manuscript that is an example of meeting the draft MIAPE-QC standard.  If meeting the MIAPE-QC standard cannot be accomplished in a long paragraph, I suspect we will need to remove some requirements to make it more practical!  (I am displaying my biases about MIAPE, and that is not really fair to you.)
  *   Our session on repositories on the morning of April 20 is intended as a brainstorming session.  Do we want PRIDE to have a webservice that will automatically generate a qcML document when given an accession?  In brief, what does qcML have to do with repositories?  Mathias, in connection with this, could you explain why embedding JSON in XML makes more sense than just writing JSON outright?


Thank you for your continued interest in our qcML endeavor!

Dave

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