Re: [Psidev-ms-dev] New version 4.0.14 of psi-ms.obo

[Eric D. <ede...@sy...>]

Thank you, Gerhard!





*From:* mayerg97 via Psidev-ms-dev [mailto:
psi...@li...]
*Sent:* Tuesday, August 08, 2017 3:06 AM
*To:* psi...@li...;
psi...@li...; Mass spectrometry standard development
<psi...@li...>
*Cc:* mayerg97 <ger...@ru...>
*Subject:* [Psidev-ms-dev] New version 4.0.14 of psi-ms.obo



Dear proteomics community,

attached there's the new version 4.0.14 of the psi-ms.obo file.
It contains new terms for OpenMS file formats.


New CV terms in version 4.0.14 of psi-ms.obo:
=============================================
************ new terms for OpenMS file formats
[Term]
id: MS:1002822
name: OpenMS file format
def: "File format developed by the OpenMS team." [PMID: 27575624]
is_a: MS:1001459 ! file format

[Term]
id: MS:1002823
name: idXML
def: "OpenMS intermediate identification format." [PSI:PI]
is_a: MS:1002822 ! OpenMS file format

[Term]
id: MS:1002824
name: featureXML
def: "OpenMS feature file format." [PSI:PI]
is_a: MS:1002822 ! OpenMS file format

[Term]
id: MS:1002825
name: consensusXML
def: "OpenMS consensus map format." [PSI:PI]
is_a: MS:1002822 ! OpenMS file format


Changed CV terms in version 4.0.14 of psi-ms.obo:
=================================================
************ Changed name from
************ Andromeda result file --> Andromeda result format
[Term]
id: MS:1002576
name: Andromeda result format
def: "Andromeda result file output format." [PSI:PI]
is_a: MS:1001040 ! intermediate analysis format

************ Changed the definitions
[Term]
id: MS:1001421
name: pepXML format
def: "The XML-based pepXML file format for encoding PSM information,
created and maintained by the Trans-Proteomic Pipeline developers." [PSI:PI]
is_a: MS:1001040 ! intermediate analysis format

[Term]
id: MS:1001422
name: protXML format
def: "The XML-based protXML file format for encoding protein
identifications, created and maintained by the Trans-Proteomic Pipeline
developers." [PSI:PI]
is_a: MS:1001040 ! intermediate analysis format

Best Regards,
Gerhard

-- 

*--------------------------------------------------------------------*

*Dipl. Inform. med., Dipl. Wirtsch. Inf. GERHARD MAYER*

*PhD student*

*Medizinisches Proteom-Center*

*DEPARTMENT Medical Bioinformatics*

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