Re: [Psidev-ms-dev] Release candidate 4.0.14_rc1 of psi-ms.obo

[Neumann, S. <sne...@ip...>]

Hi,

I am a bit unsure about this description as OpenMS *specific* formats, 
what if xcms would read/write that one day ? 

While we have prior examples (MGF ...) a slight modification 
could be "File format developed by the OpenMS team."

I know that this is nitpicking, just wanted to share my 2c,
and it's the OpenMS team and/or Gerd to decide.

Yours,
Steffen


On Fri, 2017-07-21 at 09:32 +0200, mayerg97 via Psidev-ms-dev wrote:
> Dear proteomics community,
> 
> attached there's the release candidate 4.0.14_rc1 of the psi-ms.obo
> file.
> It contains new terms for OpenMS file formats.
> 
> 
> New CV terms in version 4.0.14_rc1 of psi-ms.obo:
> =================================================
> ************ new terms for OpenMS file formats
> [Term]
> id: MS:1002822
> name: OpenMS file format
> def: "A file format specific for the OpenMS software." [PMID:
> 27575624]
> is_a: MS:1001459 ! file format
> 
> [Term]
> id: MS:1002823
> name: idXML
> def: "OpenMS intermediate identification format." [PSI:PI]
> is_a: MS:1002822 ! OpenMS file format
> 
> [Term]
> id: MS:1002824
> name: featureXML
> def: "OpenMS feature file format." [PSI:PI]
> is_a: MS:1002822 ! OpenMS file format
> 
> [Term]
> id: MS:1002825
> name: consensusXML
> def: "OpenMS consensus map format." [PSI:PI]
> is_a: MS:1002822 ! OpenMS file format
> 
> 
> Best Regards,
> Gerhard
> -- 
> --------------------------------------------------------------------
> Dipl. Inform. med., Dipl. Wirtsch. Inf. GERHARD MAYER
> PhD student
> Medizinisches Proteom-Center
> DEPARTMENT Medical Bioinformatics
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-- 

IPB Halle                    AG Massenspektrometrie & Bioinformatik
Dr. Steffen Neumann          http://www.IPB-Halle.DE
Weinberg 3                   http://msbi.bic-gh.de
06120 Halle                  Tel. +49 (0) 345 5582 - 1470
                                  +49 (0) 345 5582 - 0
sneumann(at)IPB-Halle.DE     Fax. +49 (0) 345 5582 - 1409