From: andrewrobertjones <not...@gi...> - 2016-05-13 14:07:12
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@germa Can you investigate Message 1, I can't obviously spot what is wrong with our file https://github.com/HUPO-PSI/mzIdentML/blob/master/examples/1_2examples/ProteoAnnotator/ProteoAnnotator_1_2.mzid.gz In terms of Message 2, we decided to role back on this rule so it is no longer required, and can be safely deleted from mapping file: Rule ID: SpectrumIdentificationList_must_rule @fghali Message 3 is something for you to fix. MS:1002404 needs to be on the ProteinDetectionList, with a value of the number of PAGs with passThreshold=true. This should be inserted by ProteoGrouper. If you need help with this part of (my) code, let me know --- You are receiving this because you are subscribed to this thread. Reply to this email directly or view it on GitHub: https://github.com/HUPO-PSI/mzIdentML/issues/4#issuecomment-219052974 |