[Psidev-pi-dev] [HUPO-PSI/mzIdentML] CV terms for PSM, peptide, protein, protein group and mod localisation - need clean up (#25)

[andrewrobertjones <not...@gi...>]

Just opening a comment here to remind us we need to do this. In Ghent, we discussed making different CV terms for all of PSM, peptide, protein, protein group and mod localisation so that reading software could easily tell, say under SpectrumIdentificationItem, whether the score is for a PSM, peptide or mod localisation. 

Mod localisation will have to specific terms anyway, since the values have a special structure. Most important work therefore is separating PSM and peptide-level scores, so a reader can figure this out.

I have assigned to @edeutsch since Eric offered to take a look in Ghent, but other helpers would be very welcome!

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