Re: [Psidev-pi-dev] [HUPO-PSI/mzIdentML] Consensus Spectra (labelled and unlabelled cross-linkers) (#19)

[andrewrobertjones <not...@gi...>]

Further note - I've spotted there is a problem with this encoding. The chargeState is not specified whether it is experimental or calculated. We need to know the charge value for both calculated and experimental, if we go down this route of using the values in this way. The documentation is not very helpful here: 

`<xsd:attribute name="chargeState" type="xsd:int" use="required">
					<xsd:annotation>
						<xsd:documentation>The charge state of the identified peptide.</xsd:documentation>
					</xsd:annotation>
				</xsd:attribute>
				<xsd:attribute name="experimentalMassToCharge" type="xsd:double" use="required">
					<xsd:annotation>
						<xsd:documentation>The mass-to-charge value measured in the experiment in Daltons / charge. </xsd:documentation>
					</xsd:annotation>
				</xsd:attribute>
				<xsd:attribute name="calculatedMassToCharge" type="xsd:double">
					<xsd:annotation>
						<xsd:documentation>The theoretical mass-to-charge value calculated for the peptide in Daltons / charge. </xsd:documentation>
					</xsd:annotation>
				</xsd:attribute>`

---
You are receiving this because you are subscribed to this thread.
Reply to this email directly or view it on GitHub:
https://github.com/HUPO-PSI/mzIdentML/issues/19#issuecomment-216556301