[Psidev-pi-dev] New version 3.81.0 of psi-ms.obo

[mayerg97 <ger...@ru...>]

Dear proteomics community,

attached you find the new version 3.81 of the psi-ms.obo file.

New CV terms in version 3.81.0 of psi-ms.obo:
=============================================
************ Terms for the MS1 format and DTASelect
[Term]
id: MS:1002597
name: MS1 format
def: "MS1 file format for MS1 spectral data." [PMID:15317041, 
DOI:10.1002/rcm.1603]
is_a: MS:1000560 ! mass spectrometer file format

[Term]
id: MS:1002598
name: DTASelect
def: "Analysis software designed to reassemble the SEQUEST peptide 
identifications and to highlight the most significant matches." 
[PMID:12643522, http://fields.scripps.edu/DTASelect/]
is_a: MS:1001456 ! analysis software


Changed CV terms in version 3.81.0 of psi-ms.obo:
=================================================
************ Changed the is_a relationship from
************ intermediate analysis format to
************ mass spectrometer file format
[Term]
id: MS:1001466
name: MS2 format
def: "MS2 file format for MS2 spectral data." [PMID:15317041, 
DOI:10.1002/rcm.1603, http://fields.scripps.edu/sequest/SQTFormat.html]
is_a: MS:1000560 ! mass spectrometer file format

************ Added string value type
[Term]
id: MS:1001922
name: Digital Object Identifier (DOI)
def: "DOI unique identifier of a publication." [PSI:PI, http://dx.doi.org]
xref: value-type:xsd\:string "The allowed value-type for this CV term."
synonym: "doi" EXACT []
is_a: MS:1000878 ! external reference identifier
relationship: has_regexp MS:1002480 ! 
(10[.][0-9]\{4,\}(?:[.][0-9]+)*/(?:(?![\"&\'<>])[^ \t\\r\n\\v\\f])+)

************ Changed the definition to be more descriptive
[Term]
id: MS:1002596
name: ProLuCID
def: "The SEQUEST-like sequence search engine ProLuCID, developed in the 
Yates Lab at the Scripps Research Institute." [PMID:26171723]
is_a: MS:1001456 ! analysis software


Best Regards,
Gerhard

-- 

*--*

*Dipl. Inform. med., Dipl. Wirtsch. **Inf. GERHARD MAYER*

*PhD student*

*Medizinisches Proteom-Center*

*DEPARTMENT Medical Bioinformatics*

*Building *ZKF E.049a | Universitätsstraße 150 | D-44801 Bochum

*Fon *+49 (0)234 32-21006 | *Fax *+49 (0)234 32-14554

*E-mail***ger...@ru... <mailto:ger...@ru...>

www.medizinisches-proteom-center.de 
<http://www.medizinisches-proteom-center.de/>