Re: [Psidev-ms-dev] PEFF call Thursday 8am Seattle, 4pm UK time

[Eric D. <ede...@sy...>]

Hi everyone, just a reminder about the PEFF call tomorrow, see below for
details. Dial-in information:



Dial in numbers:

+ Germany: 08001012079

+ Switzerland: 0800000860

+ UK: 08081095644

+ Generic international: +44 2083222500 (UK number)

+ US: 877-420-0272



*access code: 297427 #*





*From:* Eric Deutsch [mailto:ede...@sy...]
*Sent:* Monday, May 18, 2015 2:36 PM
*To:* Pierre-Alain Binz; jim...@th...; Patrick Pedrioli;
en...@uw...; cha...@cg...; xia...@va...; Lydie
Lane; Matt Chambers; Har...@bi...; David Creasy; Eugene
Kapp; ju...@eb...; Ger...@gm...; Jones, Andy; Yasset
Perez-Riverol
*Cc:* Mass spectrometry standard development;
psi...@li...; Eric Deutsch
*Subject:* PEFF call Thursday 8am Seattle, 4pm UK time



Hi everyone, it appears that we have near consensus for Thursday at the
earlier timeslot 8am PDT, 4pm UK time, so let’s plan on that.



Agenda:

- Review what remains to be done

- Discuss (CTRL+A) header delimiter

- Discuss degree of sequence variant complexity to support

- Discuss degree of PTM complexity to support

- Support for UniMod vs. PSI-MOD

- Review examples of PEFF

- Review PEFF-supporting software

- Central location for all supporting documentation

- Time slot for future calls



We may not get through this all, but let’s tackle as much as we can and
continue at the next call. I’m presenting at the top of the next hour, so
I’d like to limit this call to 55 mins.



I will send out dial-in information and reminder as we get closer.



Thanks,

Eric





*From:* Eric Deutsch [mailto:ede...@sy...]
*Sent:* Friday, May 15, 2015 10:05 AM
*To:* Pierre-Alain Binz; jim...@th...; Patrick Pedrioli;
en...@uw...; cha...@cg...; xia...@va...; Lydie
Lane; Matt Chambers; Har...@bi...; David Creasy; Eugene
Kapp; Eric Deutsch; ju...@eb...; Ger...@gm...
*Cc:* Mass spectrometry standard development;
psi...@li...
*Subject:* PEFF progress and call next week and beyond



Hi everyone, we would like to set up some regular calls to carry PEFF over
the finish line. We had a good discussion at the PSI meeting, so we just
need to keep some momentum to get it finished.



I would like to set up a time next week to have conference call to discuss
some of the open issues. If you are interested in working to help complete
and resubmit PEFF, please complete the Doodle poll below (even if you
cannot attend at the suggested times next week) and I will keep you in the
loop for continuing development on this. I have sent this to the list of
coauthors on the specification and other vocal participants at the workshop
that I recall. Anyone else is welcome to join the effort even if I forgot
to add you to the list above.



http://doodle.com/but4z7ihv75byyp7



Attached are the latest document and the notes I took during the PSI
workshop.



Please respond to the doodle poll and I will email some specific agenda
point in advance of the meeting.



We should probably paste some more information here:

http://www.psidev.info/peff



Please email me if you have specific agenda items or other questions or
comments.



thanks,

Eric